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    ATCC cell lines iat2 type 2 pneumocytes crem
    Cell Lines Iat2 Type 2 Pneumocytes Crem, supplied by ATCC, used in various techniques. Bioz Stars score: 99/100, based on 17976 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/product/cell+lines+iat2+type+2+pneumocytes+crem/Vero/pm33259812-483-130-142
    Average 99 stars, based on 17976 article reviews
    cell lines iat2 type 2 pneumocytes crem - by Bioz Stars, 2026-09
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    Tandem Mass Spectroscopy:

    Article Title: Actionable Cytopathogenic Host Responses of Human Alveolar Type 2 Cells to SARS-CoV-2
    Article Snippet: REAGENT or RESOURCE SOURCE IDENTIFIER Antibodies SARS-CoV-2 nucleocapsid (N) Sino Biological Cat # 40143-R019; RRID: AB_2827977 Alexa Fluor 488 AffiniPure Donkey Anti-Rabbit Jackson ImmunoResearch Cat # 711-545-252; RRID: AB_3213584 anti-y-tubulin Sigma Cat # T5326; RRID: AB_532292 anti-SARS-CoV-N Rockland Cat # 200-401-A50; RRID: AB_828403 anti-mouse IgG AlexaFluor647 Invitrogen Cat # A32787; RRID: AB_2762830 anti-rabbit IgG AlexaFluor 488 Invitrogen Cat # A-11008; RRID: AB_143165 Non-p-4ebp1 Cell Signaling Cat # 4923; RRID: AB_659944 4EBP1 Cell Signaling Cat # 9644; RRID: AB_2097841 p-RPS6 Cell Signaling Cat # 2211; RRID: AB_331679 RPS6 Santa Cruz Cat # sc-74459; RRID: AB_1129205 Phospho-CaMKII(b/g/d) Invitrogen Cat # PA5-34663; RRID: AB_2827977 CAMKII-d Invitrogen Cat # PA5-37833 ; RRID: AB_2554441 p-ERK1/2 Cell Signaling Cat # 9101 ; RRID: AB_331646 ERK1/2 Cell Signaling Cat # 4696 ; RRID: AB_390780 LATS1 Cell Signaling Cat # 3477 ; RRID: AB_2133513 p-YAP Cell Signaling Cat # 13008 ; RRID: AB_2650553 p-TAZ Cell Signaling Cat # 59971 ; RRID: AB_2799578 YAP/TAZ Cell Signaling Cat # 8418 ; RRID: AB_10950494 p-YBX1 Cell Signaling Cat # 2900 ; RRID: AB_2219273 YBX1 Santa Cruz Cat # sc-101198 ; RRID: AB_2219288 p-AKT Cell Signaling Cat # 9275 ; RRID: AB_329828 AKT Cell Signaling Cat # 9272 ; RRID: AB_329827 p-mTOR Cell Signaling Cat # 2971 ; RRID: AB_330970 p-mTOR Cell Signaling Cat # 2974 ; RRID: AB_2262884 mTOR Invitrogen Cat # PA5-34663 ; RRID: AB_2552015 Alexa Fluor 488 Goat anti-Mouse Secondary Antibody ThermoFisher Cat # A-11029 ; RRID: AB_2534088 anti-SARS-CoV-2 Nucleocapsid (N) Sino Biological Cat # 40143-MM05 ; RRID: AB_2827973 Bacterial and Virus Strains SARS-CoV-2 isolate USA_WA1/2020 WRCEVA USA_WA1/2020 Biological Samples Human lung sections – post mortem Boston Medical Center Boston University IRB Protocol H-37859 Chemicals, Peptides, and Recombinant Proteins WAY-600 mTOR inhibitor MedChemExpress HY-15272 WYE-125132 mTOR inhibitor MedChemExpress HY-10044 TMTpro 16plex Label Reagent Thermo A44520 Pierce Trypsin Protease, MS Grade Thermo 90058 aclarubicin Enzo BML-AW8655-0005 alisertib Selleck S1133 axitinib Selleck S1005 AZ20 Selleck S7050 AZD5363 Selleck S8019 bosutinib Selleck S1014 brequinar Broad Institute* PMID: 27641501* (Continued on next page) Molecular Cell 80, 1104–1122.e1–e9, December 17, 2020 e1 .. REAGENT or RESOURCE SOURCE IDENTIFIER danusertib Selleck S1107 dorsomorphin Selleck S7840 ellagic-acid Selleck S1327 emricasan Selleck S7775 FRAX486 Selleck S7807 KN-93 Selleck S7423 levofloxacin Selleck S1940 losmapimod Selleck S7215 NVP-BEZ235 Selleck S1009 PCI-27483 Cayman 21334 PFI-3 Selleck S7315 RK-33 Selleck S8246 Roflumilast Selleck S2131 SB-415286 Selleck S2729 sirolimus Selleck S1039 SRPIN340 Selleck S7270 teriflunomide Selleck S4169 TG-003 Selleck S7320 TIC10 Selleck S7963 tideglusib Selleck S2823 tubercidin Selleck S8095 vandetanib Selleck S1046 VE-822 Selleck S7102 volasertib Selleck S2235 Critical Commercial Assays Pierce Quantitative Colorimetric Peptide Assay Thermo 23275 Deposited Data Raw MS/MS data and search results This Paper ProteomeXchange - PRIDE: PXD020183 Human Proteome, all canonical reviewed sequences Swiss-Prot, uniprot.org Downloaded 2020-02-10 SARS-CoV-2 Proteome, all Swiss-Prot and TrEMBL sequences Uniprot.org Downloaded 2020-05-03 Imaging and processed data This Paper https://doi.org/10.17632/vhm7zh5ssp.2 Experimental Models: Cell Lines iAT2 Type 2 Pneumocytes CReM, Boston University SPC2-ST-B2 Vero E6 ATCC CRL-1586 Oligonucleotides CCNL_F_1 IDT TGAACGTAATCAAACCCTGGTTCA CCNL-Int_R_3 IDT CCTCTGCACTTCAGCCCATG CCNL1_R_2 IDT TTGCATCTACCTTGCAGCTAGAGC DOCK4_F_1 IDT TCCTCCTCACTGTCCTCACAAGC DOCK4_int_R_3 IDT AAAGCCTAGGCACGCTGCAC DOCK4_R_2 IDT TCACTCGGCTTCACCTAATGTGA FERMT3_F_1 IDT ATCTACCTGCGGTGCCAGGA FERMT3_R_2 IDT TCCAGCGAAAGTTCAAGGCC RBM5_F_1 IDT TAAGCCGTGGTTTCGCCTTC RBM5_R_2 IDT TGGTGATTCAAGGAAAGCACATTG NPR2_F_1 IDT GGCATGGCCTTTCTCCACAA NPR2_R_2 IDT GAACCCCTTGCCAACCACAG (Continued on next page) ll Resource e2 Molecular Cell 80, 1104–1122.e1–e9, December 17, 2020 .. REAGENT or RESOURCE SOURCE IDENTIFIER FMR1_F_1 IDT TGTAGCAGGGGAATCCCAGAA FMR1_R_2 IDT CAGCATCGCTAATGCCACTGTT CLK1_F_1 IDT TGAACCTGGACATCGCCA CLK1_int_R_3 IDT GGTTGGCTCCTAATTGACATTCCA CLK1_R_2 IDT GGAAAAGTTGTGGAGTGCATCG Software and Algorithms MaxQuant (1.6.7.0) Max Planck Institute https:// maxquant.org/ 1.6.7.0 Cytoscape (3.8.0) Cytoscape Consortium https:// cytoscape.org/ 3.8.0 CellProfiler Analyst Broad Institute https:// cellprofiler.org/cp-analyst 2.2.1 CellProfiler Broad Institute https:// cellprofiler.org/ 3.1.9 QuPath Centre for Cancer Research & Cell Biology https://qupath.github.io/ v0.2.0 Other Orbitrap Exploris 480 Mass Spectrometer Thermo Exploris 480 Q-Exactive HF-X Mass Spectrometer Thermo HF-X Agilent 1100 Series HPLC Agilent 1100 HPLC Electron Microscope with TVIPS F216 CMOS camera Philips CM12 Cytation 1 Cell Imaging Multi-Mode Reader BioTek BTCYT1V Nikon Ti2 Eclipse and Photometrics Prime BSI camera Nikon Nikon Ti2 ll

    Article Title: Actionable Cytopathogenic Host Responses of Human Alveolar Type 2 Cells to SARS-CoV-2.
    Article Snippet: REAGENT or RESOURCE SOURCE IDENTIFIER Antibodies SARS-CoV-2 nucleocapsid (N) Sino Biological Cat # 40143-R019; RRID: AB_2827977 Alexa Fluor 488 AffiniPure Donkey Anti-Rabbit Jackson ImmunoResearch Cat # 711-545-252; RRID: AB_3213584 anti-y-tubulin Sigma Cat # T5326; RRID: AB_532292 anti-SARS-CoV-N Rockland Cat # 200-401-A50; RRID: AB_828403 anti-mouse IgG AlexaFluor647 Invitrogen Cat # A32787; RRID: AB_2762830 anti-rabbit IgG AlexaFluor 488 Invitrogen Cat # A-11008; RRID: AB_143165 Non-p-4ebp1 Cell Signaling Cat # 4923; RRID: AB_659944 4EBP1 Cell Signaling Cat # 9644; RRID: AB_2097841 p-RPS6 Cell Signaling Cat # 2211; RRID: AB_331679 RPS6 Santa Cruz Cat # sc-74459; RRID: AB_1129205 Phospho-CaMKII(b/g/d) Invitrogen Cat # PA5-34663; RRID: AB_2827977 CAMKII-d Invitrogen Cat # PA5-37833 ; RRID: AB_2554441 p-ERK1/2 Cell Signaling Cat # 9101 ; RRID: AB_331646 ERK1/2 Cell Signaling Cat # 4696 ; RRID: AB_390780 LATS1 Cell Signaling Cat # 3477 ; RRID: AB_2133513 p-YAP Cell Signaling Cat # 13008 ; RRID: AB_2650553 p-TAZ Cell Signaling Cat # 59971 ; RRID: AB_2799578 YAP/TAZ Cell Signaling Cat # 8418 ; RRID: AB_10950494 p-YBX1 Cell Signaling Cat # 2900 ; RRID: AB_2219273 YBX1 Santa Cruz Cat # sc-101198 ; RRID: AB_2219288 p-AKT Cell Signaling Cat # 9275 ; RRID: AB_329828 AKT Cell Signaling Cat # 9272 ; RRID: AB_329827 p-mTOR Cell Signaling Cat # 2971 ; RRID: AB_330970 p-mTOR Cell Signaling Cat # 2974 ; RRID: AB_2262884 mTOR Invitrogen Cat # PA5-34663 ; RRID: AB_2552015 Alexa Fluor 488 Goat anti-Mouse Secondary Antibody ThermoFisher Cat # A-11029 ; RRID: AB_2534088 anti-SARS-CoV-2 Nucleocapsid (N) Sino Biological Cat # 40143-MM05 ; RRID: AB_2827973 Bacterial and Virus Strains SARS-CoV-2 isolate USA_WA1/2020 WRCEVA USA_WA1/2020 Biological Samples Human lung sections – post mortem Boston Medical Center Boston University IRB Protocol H-37859 Chemicals, Peptides, and Recombinant Proteins WAY-600 mTOR inhibitor MedChemExpress HY-15272 WYE-125132 mTOR inhibitor MedChemExpress HY-10044 TMTpro 16plex Label Reagent Thermo A44520 Pierce Trypsin Protease, MS Grade Thermo 90058 aclarubicin Enzo BML-AW8655-0005 alisertib Selleck S1133 axitinib Selleck S1005 AZ20 Selleck S7050 AZD5363 Selleck S8019 bosutinib Selleck S1014 brequinar Broad Institute* PMID: 27641501* (Continued on next page) Molecular Cell 80, 1104–1122.e1–e9, December 17, 2020 e1 .. REAGENT or RESOURCE SOURCE IDENTIFIER danusertib Selleck S1107 dorsomorphin Selleck S7840 ellagic-acid Selleck S1327 emricasan Selleck S7775 FRAX486 Selleck S7807 KN-93 Selleck S7423 levofloxacin Selleck S1940 losmapimod Selleck S7215 NVP-BEZ235 Selleck S1009 PCI-27483 Cayman 21334 PFI-3 Selleck S7315 RK-33 Selleck S8246 Roflumilast Selleck S2131 SB-415286 Selleck S2729 sirolimus Selleck S1039 SRPIN340 Selleck S7270 teriflunomide Selleck S4169 TG-003 Selleck S7320 TIC10 Selleck S7963 tideglusib Selleck S2823 tubercidin Selleck S8095 vandetanib Selleck S1046 VE-822 Selleck S7102 volasertib Selleck S2235 Critical Commercial Assays Pierce Quantitative Colorimetric Peptide Assay Thermo 23275 Deposited Data Raw MS/MS data and search results This Paper ProteomeXchange - PRIDE: PXD020183 Human Proteome, all canonical reviewed sequences Swiss-Prot, uniprot.org Downloaded 2020-02-10 SARS-CoV-2 Proteome, all Swiss-Prot and TrEMBL sequences Uniprot.org Downloaded 2020-05-03 Imaging and processed data This Paper https://doi.org/10.17632/vhm7zh5ssp.2 Experimental Models: Cell Lines iAT2 Type 2 Pneumocytes CReM, Boston University SPC2-ST-B2 Vero E6 ATCC CRL-1586 Oligonucleotides CCNL_F_1 IDT TGAACGTAATCAAACCCTGGTTCA CCNL-Int_R_3 IDT CCTCTGCACTTCAGCCCATG CCNL1_R_2 IDT TTGCATCTACCTTGCAGCTAGAGC DOCK4_F_1 IDT TCCTCCTCACTGTCCTCACAAGC DOCK4_int_R_3 IDT AAAGCCTAGGCACGCTGCAC DOCK4_R_2 IDT TCACTCGGCTTCACCTAATGTGA FERMT3_F_1 IDT ATCTACCTGCGGTGCCAGGA FERMT3_R_2 IDT TCCAGCGAAAGTTCAAGGCC RBM5_F_1 IDT TAAGCCGTGGTTTCGCCTTC RBM5_R_2 IDT TGGTGATTCAAGGAAAGCACATTG NPR2_F_1 IDT GGCATGGCCTTTCTCCACAA NPR2_R_2 IDT GAACCCCTTGCCAACCACAG (Continued on next page) ll Resource e2 Molecular Cell 80, 1104–1122.e1–e9, December 17, 2020 .. REAGENT or RESOURCE SOURCE IDENTIFIER FMR1_F_1 IDT TGTAGCAGGGGAATCCCAGAA FMR1_R_2 IDT CAGCATCGCTAATGCCACTGTT CLK1_F_1 IDT TGAACCTGGACATCGCCA CLK1_int_R_3 IDT GGTTGGCTCCTAATTGACATTCCA CLK1_R_2 IDT GGAAAAGTTGTGGAGTGCATCG Software and Algorithms MaxQuant (1.6.7.0) Max Planck Institute https:// maxquant.org/ 1.6.7.0 Cytoscape (3.8.0) Cytoscape Consortium https:// cytoscape.org/ 3.8.0 CellProfiler Analyst Broad Institute https:// cellprofiler.org/cp-analyst 2.2.1 CellProfiler Broad Institute https:// cellprofiler.org/ 3.1.9 QuPath Centre for Cancer Research & Cell Biology https://qupath.github.io/ v0.2.0 Other Orbitrap Exploris 480 Mass Spectrometer Thermo Exploris 480 Q-Exactive HF-X Mass Spectrometer Thermo HF-X Agilent 1100 Series HPLC Agilent 1100 HPLC Electron Microscope with TVIPS F216 CMOS camera Philips CM12 Cytation 1 Cell Imaging Multi-Mode Reader BioTek BTCYT1V Nikon Ti2 Eclipse and Photometrics Prime BSI camera Nikon Nikon Ti2 ll

    Imaging:

    Article Title: Actionable Cytopathogenic Host Responses of Human Alveolar Type 2 Cells to SARS-CoV-2
    Article Snippet: REAGENT or RESOURCE SOURCE IDENTIFIER Antibodies SARS-CoV-2 nucleocapsid (N) Sino Biological Cat # 40143-R019; RRID: AB_2827977 Alexa Fluor 488 AffiniPure Donkey Anti-Rabbit Jackson ImmunoResearch Cat # 711-545-252; RRID: AB_3213584 anti-y-tubulin Sigma Cat # T5326; RRID: AB_532292 anti-SARS-CoV-N Rockland Cat # 200-401-A50; RRID: AB_828403 anti-mouse IgG AlexaFluor647 Invitrogen Cat # A32787; RRID: AB_2762830 anti-rabbit IgG AlexaFluor 488 Invitrogen Cat # A-11008; RRID: AB_143165 Non-p-4ebp1 Cell Signaling Cat # 4923; RRID: AB_659944 4EBP1 Cell Signaling Cat # 9644; RRID: AB_2097841 p-RPS6 Cell Signaling Cat # 2211; RRID: AB_331679 RPS6 Santa Cruz Cat # sc-74459; RRID: AB_1129205 Phospho-CaMKII(b/g/d) Invitrogen Cat # PA5-34663; RRID: AB_2827977 CAMKII-d Invitrogen Cat # PA5-37833 ; RRID: AB_2554441 p-ERK1/2 Cell Signaling Cat # 9101 ; RRID: AB_331646 ERK1/2 Cell Signaling Cat # 4696 ; RRID: AB_390780 LATS1 Cell Signaling Cat # 3477 ; RRID: AB_2133513 p-YAP Cell Signaling Cat # 13008 ; RRID: AB_2650553 p-TAZ Cell Signaling Cat # 59971 ; RRID: AB_2799578 YAP/TAZ Cell Signaling Cat # 8418 ; RRID: AB_10950494 p-YBX1 Cell Signaling Cat # 2900 ; RRID: AB_2219273 YBX1 Santa Cruz Cat # sc-101198 ; RRID: AB_2219288 p-AKT Cell Signaling Cat # 9275 ; RRID: AB_329828 AKT Cell Signaling Cat # 9272 ; RRID: AB_329827 p-mTOR Cell Signaling Cat # 2971 ; RRID: AB_330970 p-mTOR Cell Signaling Cat # 2974 ; RRID: AB_2262884 mTOR Invitrogen Cat # PA5-34663 ; RRID: AB_2552015 Alexa Fluor 488 Goat anti-Mouse Secondary Antibody ThermoFisher Cat # A-11029 ; RRID: AB_2534088 anti-SARS-CoV-2 Nucleocapsid (N) Sino Biological Cat # 40143-MM05 ; RRID: AB_2827973 Bacterial and Virus Strains SARS-CoV-2 isolate USA_WA1/2020 WRCEVA USA_WA1/2020 Biological Samples Human lung sections – post mortem Boston Medical Center Boston University IRB Protocol H-37859 Chemicals, Peptides, and Recombinant Proteins WAY-600 mTOR inhibitor MedChemExpress HY-15272 WYE-125132 mTOR inhibitor MedChemExpress HY-10044 TMTpro 16plex Label Reagent Thermo A44520 Pierce Trypsin Protease, MS Grade Thermo 90058 aclarubicin Enzo BML-AW8655-0005 alisertib Selleck S1133 axitinib Selleck S1005 AZ20 Selleck S7050 AZD5363 Selleck S8019 bosutinib Selleck S1014 brequinar Broad Institute* PMID: 27641501* (Continued on next page) Molecular Cell 80, 1104–1122.e1–e9, December 17, 2020 e1 .. REAGENT or RESOURCE SOURCE IDENTIFIER danusertib Selleck S1107 dorsomorphin Selleck S7840 ellagic-acid Selleck S1327 emricasan Selleck S7775 FRAX486 Selleck S7807 KN-93 Selleck S7423 levofloxacin Selleck S1940 losmapimod Selleck S7215 NVP-BEZ235 Selleck S1009 PCI-27483 Cayman 21334 PFI-3 Selleck S7315 RK-33 Selleck S8246 Roflumilast Selleck S2131 SB-415286 Selleck S2729 sirolimus Selleck S1039 SRPIN340 Selleck S7270 teriflunomide Selleck S4169 TG-003 Selleck S7320 TIC10 Selleck S7963 tideglusib Selleck S2823 tubercidin Selleck S8095 vandetanib Selleck S1046 VE-822 Selleck S7102 volasertib Selleck S2235 Critical Commercial Assays Pierce Quantitative Colorimetric Peptide Assay Thermo 23275 Deposited Data Raw MS/MS data and search results This Paper ProteomeXchange - PRIDE: PXD020183 Human Proteome, all canonical reviewed sequences Swiss-Prot, uniprot.org Downloaded 2020-02-10 SARS-CoV-2 Proteome, all Swiss-Prot and TrEMBL sequences Uniprot.org Downloaded 2020-05-03 Imaging and processed data This Paper https://doi.org/10.17632/vhm7zh5ssp.2 Experimental Models: Cell Lines iAT2 Type 2 Pneumocytes CReM, Boston University SPC2-ST-B2 Vero E6 ATCC CRL-1586 Oligonucleotides CCNL_F_1 IDT TGAACGTAATCAAACCCTGGTTCA CCNL-Int_R_3 IDT CCTCTGCACTTCAGCCCATG CCNL1_R_2 IDT TTGCATCTACCTTGCAGCTAGAGC DOCK4_F_1 IDT TCCTCCTCACTGTCCTCACAAGC DOCK4_int_R_3 IDT AAAGCCTAGGCACGCTGCAC DOCK4_R_2 IDT TCACTCGGCTTCACCTAATGTGA FERMT3_F_1 IDT ATCTACCTGCGGTGCCAGGA FERMT3_R_2 IDT TCCAGCGAAAGTTCAAGGCC RBM5_F_1 IDT TAAGCCGTGGTTTCGCCTTC RBM5_R_2 IDT TGGTGATTCAAGGAAAGCACATTG NPR2_F_1 IDT GGCATGGCCTTTCTCCACAA NPR2_R_2 IDT GAACCCCTTGCCAACCACAG (Continued on next page) ll Resource e2 Molecular Cell 80, 1104–1122.e1–e9, December 17, 2020 .. REAGENT or RESOURCE SOURCE IDENTIFIER FMR1_F_1 IDT TGTAGCAGGGGAATCCCAGAA FMR1_R_2 IDT CAGCATCGCTAATGCCACTGTT CLK1_F_1 IDT TGAACCTGGACATCGCCA CLK1_int_R_3 IDT GGTTGGCTCCTAATTGACATTCCA CLK1_R_2 IDT GGAAAAGTTGTGGAGTGCATCG Software and Algorithms MaxQuant (1.6.7.0) Max Planck Institute https:// maxquant.org/ 1.6.7.0 Cytoscape (3.8.0) Cytoscape Consortium https:// cytoscape.org/ 3.8.0 CellProfiler Analyst Broad Institute https:// cellprofiler.org/cp-analyst 2.2.1 CellProfiler Broad Institute https:// cellprofiler.org/ 3.1.9 QuPath Centre for Cancer Research & Cell Biology https://qupath.github.io/ v0.2.0 Other Orbitrap Exploris 480 Mass Spectrometer Thermo Exploris 480 Q-Exactive HF-X Mass Spectrometer Thermo HF-X Agilent 1100 Series HPLC Agilent 1100 HPLC Electron Microscope with TVIPS F216 CMOS camera Philips CM12 Cytation 1 Cell Imaging Multi-Mode Reader BioTek BTCYT1V Nikon Ti2 Eclipse and Photometrics Prime BSI camera Nikon Nikon Ti2 ll

    Article Title: Actionable Cytopathogenic Host Responses of Human Alveolar Type 2 Cells to SARS-CoV-2.
    Article Snippet: REAGENT or RESOURCE SOURCE IDENTIFIER Antibodies SARS-CoV-2 nucleocapsid (N) Sino Biological Cat # 40143-R019; RRID: AB_2827977 Alexa Fluor 488 AffiniPure Donkey Anti-Rabbit Jackson ImmunoResearch Cat # 711-545-252; RRID: AB_3213584 anti-y-tubulin Sigma Cat # T5326; RRID: AB_532292 anti-SARS-CoV-N Rockland Cat # 200-401-A50; RRID: AB_828403 anti-mouse IgG AlexaFluor647 Invitrogen Cat # A32787; RRID: AB_2762830 anti-rabbit IgG AlexaFluor 488 Invitrogen Cat # A-11008; RRID: AB_143165 Non-p-4ebp1 Cell Signaling Cat # 4923; RRID: AB_659944 4EBP1 Cell Signaling Cat # 9644; RRID: AB_2097841 p-RPS6 Cell Signaling Cat # 2211; RRID: AB_331679 RPS6 Santa Cruz Cat # sc-74459; RRID: AB_1129205 Phospho-CaMKII(b/g/d) Invitrogen Cat # PA5-34663; RRID: AB_2827977 CAMKII-d Invitrogen Cat # PA5-37833 ; RRID: AB_2554441 p-ERK1/2 Cell Signaling Cat # 9101 ; RRID: AB_331646 ERK1/2 Cell Signaling Cat # 4696 ; RRID: AB_390780 LATS1 Cell Signaling Cat # 3477 ; RRID: AB_2133513 p-YAP Cell Signaling Cat # 13008 ; RRID: AB_2650553 p-TAZ Cell Signaling Cat # 59971 ; RRID: AB_2799578 YAP/TAZ Cell Signaling Cat # 8418 ; RRID: AB_10950494 p-YBX1 Cell Signaling Cat # 2900 ; RRID: AB_2219273 YBX1 Santa Cruz Cat # sc-101198 ; RRID: AB_2219288 p-AKT Cell Signaling Cat # 9275 ; RRID: AB_329828 AKT Cell Signaling Cat # 9272 ; RRID: AB_329827 p-mTOR Cell Signaling Cat # 2971 ; RRID: AB_330970 p-mTOR Cell Signaling Cat # 2974 ; RRID: AB_2262884 mTOR Invitrogen Cat # PA5-34663 ; RRID: AB_2552015 Alexa Fluor 488 Goat anti-Mouse Secondary Antibody ThermoFisher Cat # A-11029 ; RRID: AB_2534088 anti-SARS-CoV-2 Nucleocapsid (N) Sino Biological Cat # 40143-MM05 ; RRID: AB_2827973 Bacterial and Virus Strains SARS-CoV-2 isolate USA_WA1/2020 WRCEVA USA_WA1/2020 Biological Samples Human lung sections – post mortem Boston Medical Center Boston University IRB Protocol H-37859 Chemicals, Peptides, and Recombinant Proteins WAY-600 mTOR inhibitor MedChemExpress HY-15272 WYE-125132 mTOR inhibitor MedChemExpress HY-10044 TMTpro 16plex Label Reagent Thermo A44520 Pierce Trypsin Protease, MS Grade Thermo 90058 aclarubicin Enzo BML-AW8655-0005 alisertib Selleck S1133 axitinib Selleck S1005 AZ20 Selleck S7050 AZD5363 Selleck S8019 bosutinib Selleck S1014 brequinar Broad Institute* PMID: 27641501* (Continued on next page) Molecular Cell 80, 1104–1122.e1–e9, December 17, 2020 e1 .. REAGENT or RESOURCE SOURCE IDENTIFIER danusertib Selleck S1107 dorsomorphin Selleck S7840 ellagic-acid Selleck S1327 emricasan Selleck S7775 FRAX486 Selleck S7807 KN-93 Selleck S7423 levofloxacin Selleck S1940 losmapimod Selleck S7215 NVP-BEZ235 Selleck S1009 PCI-27483 Cayman 21334 PFI-3 Selleck S7315 RK-33 Selleck S8246 Roflumilast Selleck S2131 SB-415286 Selleck S2729 sirolimus Selleck S1039 SRPIN340 Selleck S7270 teriflunomide Selleck S4169 TG-003 Selleck S7320 TIC10 Selleck S7963 tideglusib Selleck S2823 tubercidin Selleck S8095 vandetanib Selleck S1046 VE-822 Selleck S7102 volasertib Selleck S2235 Critical Commercial Assays Pierce Quantitative Colorimetric Peptide Assay Thermo 23275 Deposited Data Raw MS/MS data and search results This Paper ProteomeXchange - PRIDE: PXD020183 Human Proteome, all canonical reviewed sequences Swiss-Prot, uniprot.org Downloaded 2020-02-10 SARS-CoV-2 Proteome, all Swiss-Prot and TrEMBL sequences Uniprot.org Downloaded 2020-05-03 Imaging and processed data This Paper https://doi.org/10.17632/vhm7zh5ssp.2 Experimental Models: Cell Lines iAT2 Type 2 Pneumocytes CReM, Boston University SPC2-ST-B2 Vero E6 ATCC CRL-1586 Oligonucleotides CCNL_F_1 IDT TGAACGTAATCAAACCCTGGTTCA CCNL-Int_R_3 IDT CCTCTGCACTTCAGCCCATG CCNL1_R_2 IDT TTGCATCTACCTTGCAGCTAGAGC DOCK4_F_1 IDT TCCTCCTCACTGTCCTCACAAGC DOCK4_int_R_3 IDT AAAGCCTAGGCACGCTGCAC DOCK4_R_2 IDT TCACTCGGCTTCACCTAATGTGA FERMT3_F_1 IDT ATCTACCTGCGGTGCCAGGA FERMT3_R_2 IDT TCCAGCGAAAGTTCAAGGCC RBM5_F_1 IDT TAAGCCGTGGTTTCGCCTTC RBM5_R_2 IDT TGGTGATTCAAGGAAAGCACATTG NPR2_F_1 IDT GGCATGGCCTTTCTCCACAA NPR2_R_2 IDT GAACCCCTTGCCAACCACAG (Continued on next page) ll Resource e2 Molecular Cell 80, 1104–1122.e1–e9, December 17, 2020 .. REAGENT or RESOURCE SOURCE IDENTIFIER FMR1_F_1 IDT TGTAGCAGGGGAATCCCAGAA FMR1_R_2 IDT CAGCATCGCTAATGCCACTGTT CLK1_F_1 IDT TGAACCTGGACATCGCCA CLK1_int_R_3 IDT GGTTGGCTCCTAATTGACATTCCA CLK1_R_2 IDT GGAAAAGTTGTGGAGTGCATCG Software and Algorithms MaxQuant (1.6.7.0) Max Planck Institute https:// maxquant.org/ 1.6.7.0 Cytoscape (3.8.0) Cytoscape Consortium https:// cytoscape.org/ 3.8.0 CellProfiler Analyst Broad Institute https:// cellprofiler.org/cp-analyst 2.2.1 CellProfiler Broad Institute https:// cellprofiler.org/ 3.1.9 QuPath Centre for Cancer Research & Cell Biology https://qupath.github.io/ v0.2.0 Other Orbitrap Exploris 480 Mass Spectrometer Thermo Exploris 480 Q-Exactive HF-X Mass Spectrometer Thermo HF-X Agilent 1100 Series HPLC Agilent 1100 HPLC Electron Microscope with TVIPS F216 CMOS camera Philips CM12 Cytation 1 Cell Imaging Multi-Mode Reader BioTek BTCYT1V Nikon Ti2 Eclipse and Photometrics Prime BSI camera Nikon Nikon Ti2 ll

    other:

    Article Title: Actionable Cytopathogenic Host Responses of Human Alveolar Type 2 Cells to SARS-CoV-2.
    Article Snippet: REAGENT or RESOURCE SOURCE IDENTIFIER FMR1_F_1 IDT TGTAGCAGGGGAATCCCAGAA FMR1_R_2 IDT CAGCATCGCTAATGCCACTGTT CLK1_F_1 IDT TGAACCTGGACATCGCCA CLK1_int_R_3 IDT GGTTGGCTCCTAATTGACATTCCA CLK1_R_2 IDT GGAAAAGTTGTGGAGTGCATCG Software and Algorithms MaxQuant (1.6.7.0) Max Planck Institute https:// maxquant.org/ 1.6.7.0 Cytoscape (3.8.0) Cytoscape Consortium https:// cytoscape.org/ 3.8.0 CellProfiler Analyst Broad Institute https:// cellprofiler.org/cp-analyst 2.2.1 CellProfiler Broad Institute https:// cellprofiler.org/ 3.1.9 QuPath Centre for Cancer Research & Cell Biology https://qupath.github.io/ v0.2.0 Other Orbitrap Exploris 480 Mass Spectrometer Thermo Exploris 480 Q-Exactive HF-X Mass Spectrometer Thermo HF-X Agilent 1100 Series HPLC Agilent 1100 HPLC Electron Microscope with TVIPS F216 CMOS camera Philips CM12 Cytation 1 Cell Imaging Multi-Mode Reader BioTek BTCYT1V Nikon Ti2 Eclipse and Photometrics Prime BSI camera Nikon Nikon Ti2 ll

    Article Title: Actionable Cytopathogenic Host Responses of Human Alveolar Type 2 Cells to SARS-CoV-2
    Article Snippet: REAGENT or RESOURCE SOURCE IDENTIFIER FMR1_F_1 IDT TGTAGCAGGGGAATCCCAGAA FMR1_R_2 IDT CAGCATCGCTAATGCCACTGTT CLK1_F_1 IDT TGAACCTGGACATCGCCA CLK1_int_R_3 IDT GGTTGGCTCCTAATTGACATTCCA CLK1_R_2 IDT GGAAAAGTTGTGGAGTGCATCG Software and Algorithms MaxQuant (1.6.7.0) Max Planck Institute https:// maxquant.org/ 1.6.7.0 Cytoscape (3.8.0) Cytoscape Consortium https:// cytoscape.org/ 3.8.0 CellProfiler Analyst Broad Institute https:// cellprofiler.org/cp-analyst 2.2.1 CellProfiler Broad Institute https:// cellprofiler.org/ 3.1.9 QuPath Centre for Cancer Research & Cell Biology https://qupath.github.io/ v0.2.0 Other Orbitrap Exploris 480 Mass Spectrometer Thermo Exploris 480 Q-Exactive HF-X Mass Spectrometer Thermo HF-X Agilent 1100 Series HPLC Agilent 1100 HPLC Electron Microscope with TVIPS F216 CMOS camera Philips CM12 Cytation 1 Cell Imaging Multi-Mode Reader BioTek BTCYT1V Nikon Ti2 Eclipse and Photometrics Prime BSI camera Nikon Nikon Ti2 ll



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